No. words: 1360; after pruning: 1334


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.7 (1,1:643)  621  0.00 0.31 0.00  BF292295Sn27P114D02P137B071F1_054.ab1        4   643 (43)  C BF292295Sn27P114D02P137B071R1_054.ab1   (32)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BF292295Sn27P114D02P137B071R1_054.ab1   674 
  122    BF292295Sn27P114D02P137B071F1_054.ab1    91 
  130  C BF292295Sn27P114D02P137B071R1_054.ab1   545 
  134    BF292295Sn27P114D02P137B071F1_054.ab1   103 
  138  C BF292295Sn27P114D02P137B071R1_054.ab1   537 
  146    BF292295Sn27P114D02P137B071F1_054.ab1   115 
  158  C BF292295Sn27P114D02P137B071R1_054.ab1   517 
  186    BF292295Sn27P114D02P137B071F1_054.ab1   155 
  190  C BF292295Sn27P114D02P137B071R1_054.ab1   485 
  226    BF292295Sn27P114D02P137B071F1_054.ab1   195 
  294  C BF292295Sn27P114D02P137B071R1_054.ab1   381 
  302    BF292295Sn27P114D02P137B071F1_054.ab1   271 
  362  C BF292295Sn27P114D02P137B071R1_054.ab1   313 
  374    BF292295Sn27P114D02P137B071F1_054.ab1   343 
  402  C BF292295Sn27P114D02P137B071R1_054.ab1   273 
  410    BF292295Sn27P114D02P137B071F1_054.ab1   379 
  422  C BF292295Sn27P114D02P137B071R1_054.ab1   253 
  430    BF292295Sn27P114D02P137B071F1_054.ab1   399 
  446  C BF292295Sn27P114D02P137B071R1_054.ab1   229 
  506    BF292295Sn27P114D02P137B071F1_054.ab1   475 
  510  C BF292295Sn27P114D02P137B071R1_054.ab1   165 
  546    BF292295Sn27P114D02P137B071F1_054.ab1   515 
  550  C BF292295Sn27P114D02P137B071R1_054.ab1   125 
  566    BF292295Sn27P114D02P137B071F1_054.ab1   535 
  574  C BF292295Sn27P114D02P137B071R1_054.ab1   101 
  582    BF292295Sn27P114D02P137B071F1_054.ab1   551 
  594  C BF292295Sn27P114D02P137B071R1_054.ab1    81 
  610    BF292295Sn27P114D02P137B071F1_054.ab1   579 
  618  C BF292295Sn27P114D02P137B071R1_054.ab1    57 
  622    BF292295Sn27P114D02P137B071F1_054.ab1   591 
  646  C BF292295Sn27P114D02P137B071R1_054.ab1    29 
  658    BF292295Sn27P114D02P137B071F1_054.ab1   627 
Contig length: old 716, new 717

Contig length: old 717, new 717
New start: 0