No. words: 1347; after pruning: 1321


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:632)  612  0.00 0.32 0.00  BF292295Sn29P114D02P137B071F1_052.ab1        2   632 (51)  C BF292295Sn29P114D02P137B071R1_052.ab1   (31)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BF292295Sn29P114D02P137B071R1_052.ab1   664 
  281    BF292295Sn29P114D02P137B071F1_052.ab1   249 
  309  C BF292295Sn29P114D02P137B071R1_052.ab1   356 
  321    BF292295Sn29P114D02P137B071F1_052.ab1   289 
  337  C BF292295Sn29P114D02P137B071R1_052.ab1   328 
  353    BF292295Sn29P114D02P137B071F1_052.ab1   321 
  361  C BF292295Sn29P114D02P137B071R1_052.ab1   304 
  373    BF292295Sn29P114D02P137B071F1_052.ab1   341 
  425  C BF292295Sn29P114D02P137B071R1_052.ab1   240 
  433    BF292295Sn29P114D02P137B071F1_052.ab1   401 
  449  C BF292295Sn29P114D02P137B071R1_052.ab1   216 
  461    BF292295Sn29P114D02P137B071F1_052.ab1   429 
  465  C BF292295Sn29P114D02P137B071R1_052.ab1   200 
  505    BF292295Sn29P114D02P137B071F1_052.ab1   473 
  509  C BF292295Sn29P114D02P137B071R1_052.ab1   156 
  525    BF292295Sn29P114D02P137B071F1_052.ab1   493 
  533  C BF292295Sn29P114D02P137B071R1_052.ab1   132 
  541    BF292295Sn29P114D02P137B071F1_052.ab1   509 
  557  C BF292295Sn29P114D02P137B071R1_052.ab1   108 
  565    BF292295Sn29P114D02P137B071F1_052.ab1   533 
  573  C BF292295Sn29P114D02P137B071R1_052.ab1    92 
  577    BF292295Sn29P114D02P137B071F1_052.ab1   545 
  605  C BF292295Sn29P114D02P137B071R1_052.ab1    60 
  609    BF292295Sn29P114D02P137B071F1_052.ab1   577 
  617  C BF292295Sn29P114D02P137B071R1_052.ab1    48 
  625    BF292295Sn29P114D02P137B071F1_052.ab1   593 
  645  C BF292295Sn29P114D02P137B071R1_052.ab1    20 
  649    BF292295Sn29P114D02P137B071F1_052.ab1   617 
Contig length: old 714, new 715

Contig length: old 715, new 715
New start: 0