No. words: 1361; after pruning: 1335


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.7 (1,1:643)  626  0.00 0.16 0.00  BF292295Sn30P114D02P137B071F1_067.ab1        4   644 (44)  C BF292295Sn30P114D02P137B071R1_067.ab1   (31)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C BF292295Sn30P114D02P137B071R1_067.ab1   673 
   35    BF292295Sn30P114D02P137B071F1_067.ab1     7 
   39  C BF292295Sn30P114D02P137B071R1_067.ab1   635 
   61    BF292295Sn30P114D02P137B071F1_067.ab1    32 
   65  C BF292295Sn30P114D02P137B071R1_067.ab1   609 
   77    BF292295Sn30P114D02P137B071F1_067.ab1    48 
   81  C BF292295Sn30P114D02P137B071R1_067.ab1   593 
   93    BF292295Sn30P114D02P137B071F1_067.ab1    64 
   97  C BF292295Sn30P114D02P137B071R1_067.ab1   577 
  225    BF292295Sn30P114D02P137B071F1_067.ab1   196 
  233  C BF292295Sn30P114D02P137B071R1_067.ab1   441 
  281    BF292295Sn30P114D02P137B071F1_067.ab1   252 
  293  C BF292295Sn30P114D02P137B071R1_067.ab1   381 
  301    BF292295Sn30P114D02P137B071F1_067.ab1   272 
  337  C BF292295Sn30P114D02P137B071R1_067.ab1   337 
  369    BF292295Sn30P114D02P137B071F1_067.ab1   340 
  381  C BF292295Sn30P114D02P137B071R1_067.ab1   293 
  429    BF292295Sn30P114D02P137B071F1_067.ab1   400 
  453  C BF292295Sn30P114D02P137B071R1_067.ab1   221 
  537    BF292295Sn30P114D02P137B071F1_067.ab1   508 
  541  C BF292295Sn30P114D02P137B071R1_067.ab1   133 
  565    BF292295Sn30P114D02P137B071F1_067.ab1   536 
  569  C BF292295Sn30P114D02P137B071R1_067.ab1   105 
  577    BF292295Sn30P114D02P137B071F1_067.ab1   548 
  589  C BF292295Sn30P114D02P137B071R1_067.ab1    85 
  609    BF292295Sn30P114D02P137B071F1_067.ab1   580 
  617  C BF292295Sn30P114D02P137B071R1_067.ab1    57 
  629    BF292295Sn30P114D02P137B071F1_067.ab1   600 
  633  C BF292295Sn30P114D02P137B071R1_067.ab1    41 
  641    BF292295Sn30P114D02P137B071F1_067.ab1   612 
  645  C BF292295Sn30P114D02P137B071R1_067.ab1    29 
  653    BF292295Sn30P114D02P137B071F1_067.ab1   624 
Contig length: old 717, new 717

Contig length: old 717, new 717
New start: 0