No. words: 1349; after pruning: 1323


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:639)  622  0.16 0.16 0.00  BF292295Sn31P114D02P137B071F1_050.ab1        1   639 (40)  C BF292295Sn31P114D02P137B071R1_050.ab1   (30)   640     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BF292295Sn31P114D02P137B071R1_050.ab1   670 
   63    BF292295Sn31P114D02P137B071F1_050.ab1    32 
   67  C BF292295Sn31P114D02P137B071R1_050.ab1   604 
  119    BF292295Sn31P114D02P137B071F1_050.ab1    88 
  123  C BF292295Sn31P114D02P137B071R1_050.ab1   548 
  299    BF292295Sn31P114D02P137B071F1_050.ab1   268 
  339  C BF292295Sn31P114D02P137B071R1_050.ab1   332 
  371    BF292295Sn31P114D02P137B071F1_050.ab1   340 
  379  C BF292295Sn31P114D02P137B071R1_050.ab1   292 
  411    BF292295Sn31P114D02P137B071F1_050.ab1   380 
  419  C BF292295Sn31P114D02P137B071R1_050.ab1   252 
  459    BF292295Sn31P114D02P137B071F1_050.ab1   428 
  463  C BF292295Sn31P114D02P137B071R1_050.ab1   208 
  499    BF292295Sn31P114D02P137B071F1_050.ab1   468 
  511  C BF292295Sn31P114D02P137B071R1_050.ab1   160 
  527    BF292295Sn31P114D02P137B071F1_050.ab1   496 
  531  C BF292295Sn31P114D02P137B071R1_050.ab1   140 
  539    BF292295Sn31P114D02P137B071F1_050.ab1   508 
  547  C BF292295Sn31P114D02P137B071R1_050.ab1   124 
  575    BF292295Sn31P114D02P137B071F1_050.ab1   544 
  579  C BF292295Sn31P114D02P137B071R1_050.ab1    92 
  583    BF292295Sn31P114D02P137B071F1_050.ab1   552 
  587  C BF292295Sn31P114D02P137B071R1_050.ab1    84 
  607    BF292295Sn31P114D02P137B071F1_050.ab1   576 
  615  C BF292295Sn31P114D02P137B071R1_050.ab1    56 
  635    BF292295Sn31P114D02P137B071F1_050.ab1   604 
  643  C BF292295Sn31P114D02P137B071R1_050.ab1    28 
  647    BF292295Sn31P114D02P137B071F1_050.ab1   616 
Contig length: old 709, new 710

Contig length: old 710, new 710
New start: 0