No. words: 1342; after pruning: 1316


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:629)  615  0.00 0.16 0.00  BF292295Sn32P114D02P137B071F1_065.ab1        1   630 (38)  C BF292295Sn32P114D02P137B071R1_065.ab1   (43)   631     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BF292295Sn32P114D02P137B071R1_065.ab1   674 
  129    BF292295Sn32P114D02P137B071F1_065.ab1    85 
  137  C BF292295Sn32P114D02P137B071R1_065.ab1   538 
  145    BF292295Sn32P114D02P137B071F1_065.ab1   101 
  173  C BF292295Sn32P114D02P137B071R1_065.ab1   502 
  217    BF292295Sn32P114D02P137B071F1_065.ab1   173 
  233  C BF292295Sn32P114D02P137B071R1_065.ab1   442 
  261    BF292295Sn32P114D02P137B071F1_065.ab1   217 
  265  C BF292295Sn32P114D02P137B071R1_065.ab1   410 
  301    BF292295Sn32P114D02P137B071F1_065.ab1   257 
  341  C BF292295Sn32P114D02P137B071R1_065.ab1   334 
  349    BF292295Sn32P114D02P137B071F1_065.ab1   305 
  361  C BF292295Sn32P114D02P137B071R1_065.ab1   314 
  369    BF292295Sn32P114D02P137B071F1_065.ab1   325 
  421  C BF292295Sn32P114D02P137B071R1_065.ab1   254 
  441    BF292295Sn32P114D02P137B071F1_065.ab1   397 
  449  C BF292295Sn32P114D02P137B071R1_065.ab1   226 
  501    BF292295Sn32P114D02P137B071F1_065.ab1   457 
  513  C BF292295Sn32P114D02P137B071R1_065.ab1   162 
  565    BF292295Sn32P114D02P137B071F1_065.ab1   521 
  573  C BF292295Sn32P114D02P137B071R1_065.ab1   102 
  577    BF292295Sn32P114D02P137B071F1_065.ab1   533 
  597  C BF292295Sn32P114D02P137B071R1_065.ab1    78 
  613    BF292295Sn32P114D02P137B071F1_065.ab1   569 
  617  C BF292295Sn32P114D02P137B071R1_065.ab1    58 
  621    BF292295Sn32P114D02P137B071F1_065.ab1   577 
  633  C BF292295Sn32P114D02P137B071R1_065.ab1    42 
  637    BF292295Sn32P114D02P137B071F1_065.ab1   593 
  645  C BF292295Sn32P114D02P137B071R1_065.ab1    30 
  653    BF292295Sn32P114D02P137B071F1_065.ab1   609 
Contig length: old 712, new 712

Contig length: old 712, new 712
New start: 0