No. words: 1338; after pruning: 1312


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:625)  615  0.00 0.00 0.00  BF292295Ta11P114D02P137B071F1_059.ab1        1   626 (34)  C BF292295Ta11P114D02P137B071R1_059.ab1   (52)   626     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BF292295Ta11P114D02P137B071R1_059.ab1   678 
  100    BF292295Ta11P114D02P137B071F1_059.ab1    48 
  108  C BF292295Ta11P114D02P137B071R1_059.ab1   571 
  112    BF292295Ta11P114D02P137B071F1_059.ab1    60 
  124  C BF292295Ta11P114D02P137B071R1_059.ab1   555 
  144    BF292295Ta11P114D02P137B071F1_059.ab1    92 
  156  C BF292295Ta11P114D02P137B071R1_059.ab1   523 
  184    BF292295Ta11P114D02P137B071F1_059.ab1   132 
  188  C BF292295Ta11P114D02P137B071R1_059.ab1   491 
  216    BF292295Ta11P114D02P137B071F1_059.ab1   164 
  220  C BF292295Ta11P114D02P137B071R1_059.ab1   459 
  224    BF292295Ta11P114D02P137B071F1_059.ab1   172 
  236  C BF292295Ta11P114D02P137B071R1_059.ab1   443 
  300    BF292295Ta11P114D02P137B071F1_059.ab1   248 
  360  C BF292295Ta11P114D02P137B071R1_059.ab1   319 
  368    BF292295Ta11P114D02P137B071F1_059.ab1   316 
  420  C BF292295Ta11P114D02P137B071R1_059.ab1   259 
  424    BF292295Ta11P114D02P137B071F1_059.ab1   372 
  448  C BF292295Ta11P114D02P137B071R1_059.ab1   231 
  504    BF292295Ta11P114D02P137B071F1_059.ab1   452 
  508  C BF292295Ta11P114D02P137B071R1_059.ab1   171 
  524    BF292295Ta11P114D02P137B071F1_059.ab1   472 
  532  C BF292295Ta11P114D02P137B071R1_059.ab1   147 
  564    BF292295Ta11P114D02P137B071F1_059.ab1   512 
  568  C BF292295Ta11P114D02P137B071R1_059.ab1   111 
  576    BF292295Ta11P114D02P137B071F1_059.ab1   524 
  580  C BF292295Ta11P114D02P137B071R1_059.ab1    99 
  584    BF292295Ta11P114D02P137B071F1_059.ab1   532 
  588  C BF292295Ta11P114D02P137B071R1_059.ab1    91 
  608    BF292295Ta11P114D02P137B071F1_059.ab1   556 
  612  C BF292295Ta11P114D02P137B071R1_059.ab1    67 
  628    BF292295Ta11P114D02P137B071F1_059.ab1   576 
  632  C BF292295Ta11P114D02P137B071R1_059.ab1    47 
  636    BF292295Ta11P114D02P137B071F1_059.ab1   584 
  640  C BF292295Ta11P114D02P137B071R1_059.ab1    39 
  652    BF292295Ta11P114D02P137B071F1_059.ab1   600 
Contig length: old 712, new 712

Contig length: old 712, new 712
New start: 0