No. words: 1359; after pruning: 1333


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.9 (1,1:643)  621  0.00 0.31 0.00  BF292295Ta15P114D02P137B071F1_055.ab1        4   643 (43)  C BF292295Ta15P114D02P137B071R1_055.ab1   (31)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BF292295Ta15P114D02P137B071R1_055.ab1   673 
   65    BF292295Ta15P114D02P137B071F1_055.ab1    35 
   69  C BF292295Ta15P114D02P137B071R1_055.ab1   605 
   89    BF292295Ta15P114D02P137B071F1_055.ab1    59 
   93  C BF292295Ta15P114D02P137B071R1_055.ab1   581 
  105    BF292295Ta15P114D02P137B071F1_055.ab1    75 
  109  C BF292295Ta15P114D02P137B071R1_055.ab1   565 
  129    BF292295Ta15P114D02P137B071F1_055.ab1    99 
  137  C BF292295Ta15P114D02P137B071R1_055.ab1   537 
  149    BF292295Ta15P114D02P137B071F1_055.ab1   119 
  165  C BF292295Ta15P114D02P137B071R1_055.ab1   509 
  217    BF292295Ta15P114D02P137B071F1_055.ab1   187 
  233  C BF292295Ta15P114D02P137B071R1_055.ab1   441 
  261    BF292295Ta15P114D02P137B071F1_055.ab1   231 
  361  C BF292295Ta15P114D02P137B071R1_055.ab1   313 
  369    BF292295Ta15P114D02P137B071F1_055.ab1   339 
  473  C BF292295Ta15P114D02P137B071R1_055.ab1   201 
  501    BF292295Ta15P114D02P137B071F1_055.ab1   471 
  513  C BF292295Ta15P114D02P137B071R1_055.ab1   161 
  529    BF292295Ta15P114D02P137B071F1_055.ab1   499 
  549  C BF292295Ta15P114D02P137B071R1_055.ab1   125 
  565    BF292295Ta15P114D02P137B071F1_055.ab1   535 
  589  C BF292295Ta15P114D02P137B071R1_055.ab1    85 
  609    BF292295Ta15P114D02P137B071F1_055.ab1   579 
  617  C BF292295Ta15P114D02P137B071R1_055.ab1    57 
  621    BF292295Ta15P114D02P137B071F1_055.ab1   591 
  645  C BF292295Ta15P114D02P137B071R1_055.ab1    29 
  657    BF292295Ta15P114D02P137B071F1_055.ab1   627 
Contig length: old 715, new 716

Contig length: old 716, new 716
New start: 0