No. words: 1340; after pruning: 1314


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 12.4 (1,1:625)  602  0.16 0.16 0.16  BF292295Ta16P114D02P137B071F1_049.ab1        2   626 (44)  C BF292295Ta16P114D02P137B071R1_049.ab1   (45)   625     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BF292295Ta16P114D02P137B071R1_049.ab1   670 
   77    BF292295Ta16P114D02P137B071F1_049.ab1    32 
   81  C BF292295Ta16P114D02P137B071R1_049.ab1   590 
  105    BF292295Ta16P114D02P137B071F1_049.ab1    60 
  109  C BF292295Ta16P114D02P137B071R1_049.ab1   562 
  145    BF292295Ta16P114D02P137B071F1_049.ab1   100 
  165  C BF292295Ta16P114D02P137B071R1_049.ab1   506 
  217    BF292295Ta16P114D02P137B071F1_049.ab1   172 
  233  C BF292295Ta16P114D02P137B071R1_049.ab1   438 
  369    BF292295Ta16P114D02P137B071F1_049.ab1   324 
  397  C BF292295Ta16P114D02P137B071R1_049.ab1   274 
  409    BF292295Ta16P114D02P137B071F1_049.ab1   364 
  417  C BF292295Ta16P114D02P137B071R1_049.ab1   254 
  429    BF292295Ta16P114D02P137B071F1_049.ab1   384 
  461  C BF292295Ta16P114D02P137B071R1_049.ab1   210 
  513    BF292295Ta16P114D02P137B071F1_049.ab1   468 
  517  C BF292295Ta16P114D02P137B071R1_049.ab1   154 
  573    BF292295Ta16P114D02P137B071F1_049.ab1   528 
  594  C BF292295Ta16P114D02P137B071R1_049.ab1    77 
  610    BF292295Ta16P114D02P137B071F1_049.ab1   565 
  614  C BF292295Ta16P114D02P137B071R1_049.ab1    57 
  622    BF292295Ta16P114D02P137B071F1_049.ab1   577 
  646  C BF292295Ta16P114D02P137B071R1_049.ab1    25 
  650    BF292295Ta16P114D02P137B071F1_049.ab1   605 
Contig length: old 714, new 715

Contig length: old 715, new 715
New start: 0