No. words: 1356; after pruning: 1330


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.1 (1,1:643)  615  0.31 0.31 0.00  BF292295Ta17P114D02P137B071F1_064.ab1        4   643 (42)  C BF292295Ta17P114D02P137B071R1_064.ab1   (29)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BF292295Ta17P114D02P137B071R1_064.ab1   671 
  147    BF292295Ta17P114D02P137B071F1_064.ab1   119 
  159  C BF292295Ta17P114D02P137B071R1_064.ab1   513 
  183    BF292295Ta17P114D02P137B071F1_064.ab1   155 
  191  C BF292295Ta17P114D02P137B071R1_064.ab1   481 
  215    BF292295Ta17P114D02P137B071F1_064.ab1   187 
  343  C BF292295Ta17P114D02P137B071R1_064.ab1   329 
  367    BF292295Ta17P114D02P137B071F1_064.ab1   339 
  431  C BF292295Ta17P114D02P137B071R1_064.ab1   241 
  463    BF292295Ta17P114D02P137B071F1_064.ab1   435 
  471  C BF292295Ta17P114D02P137B071R1_064.ab1   201 
  527    BF292295Ta17P114D02P137B071F1_064.ab1   499 
  535  C BF292295Ta17P114D02P137B071R1_064.ab1   137 
  543    BF292295Ta17P114D02P137B071F1_064.ab1   515 
  555  C BF292295Ta17P114D02P137B071R1_064.ab1   117 
  563    BF292295Ta17P114D02P137B071F1_064.ab1   535 
  591  C BF292295Ta17P114D02P137B071R1_064.ab1    81 
  595    BF292295Ta17P114D02P137B071F1_064.ab1   567 
Contig length: old 712, new 713

Contig length: old 713, new 713
New start: 0