No. words: 1340; after pruning: 1314


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.9 (1,1:624)  603  0.00 0.32 0.00  BF292295Ta18P114D02P137B071F1_079.ab1        4   624 (62)  C BF292295Ta18P114D02P137B071R1_079.ab1   (31)   623     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BF292295Ta18P114D02P137B071R1_079.ab1   654 
   61    BF292295Ta18P114D02P137B071F1_079.ab1    31 
   69  C BF292295Ta18P114D02P137B071R1_079.ab1   586 
   89    BF292295Ta18P114D02P137B071F1_079.ab1    59 
  105  C BF292295Ta18P114D02P137B071R1_079.ab1   550 
  149    BF292295Ta18P114D02P137B071F1_079.ab1   119 
  173  C BF292295Ta18P114D02P137B071R1_079.ab1   482 
  217    BF292295Ta18P114D02P137B071F1_079.ab1   187 
  233  C BF292295Ta18P114D02P137B071R1_079.ab1   422 
  305    BF292295Ta18P114D02P137B071F1_079.ab1   275 
  365  C BF292295Ta18P114D02P137B071R1_079.ab1   290 
  373    BF292295Ta18P114D02P137B071F1_079.ab1   343 
  401  C BF292295Ta18P114D02P137B071R1_079.ab1   254 
  429    BF292295Ta18P114D02P137B071F1_079.ab1   399 
  433  C BF292295Ta18P114D02P137B071R1_079.ab1   222 
  441    BF292295Ta18P114D02P137B071F1_079.ab1   411 
  489  C BF292295Ta18P114D02P137B071R1_079.ab1   166 
  501    BF292295Ta18P114D02P137B071F1_079.ab1   471 
  513  C BF292295Ta18P114D02P137B071R1_079.ab1   142 
  537    BF292295Ta18P114D02P137B071F1_079.ab1   507 
  545  C BF292295Ta18P114D02P137B071R1_079.ab1   110 
  565    BF292295Ta18P114D02P137B071F1_079.ab1   535 
  601  C BF292295Ta18P114D02P137B071R1_079.ab1    54 
  609    BF292295Ta18P114D02P137B071F1_079.ab1   579 
  617  C BF292295Ta18P114D02P137B071R1_079.ab1    38 
  621    BF292295Ta18P114D02P137B071F1_079.ab1   591 
  645  C BF292295Ta18P114D02P137B071R1_079.ab1    10 
  649    BF292295Ta18P114D02P137B071F1_079.ab1   619 
Contig length: old 715, new 716

Contig length: old 716, new 716
New start: 0