No. words: 1355; after pruning: 1329


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.9 (1,1:642)  610  0.31 0.31 0.16  BF292295Ta19P114D02P137B071F1_062.ab1        4   643 (42)  C BF292295Ta19P114D02P137B071R1_062.ab1   (29)   641     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BF292295Ta19P114D02P137B071R1_062.ab1   670 
   75    BF292295Ta19P114D02P137B071F1_062.ab1    47 
   79  C BF292295Ta19P114D02P137B071R1_062.ab1   592 
   99    BF292295Ta19P114D02P137B071F1_062.ab1    71 
  107  C BF292295Ta19P114D02P137B071R1_062.ab1   564 
  143    BF292295Ta19P114D02P137B071F1_062.ab1   115 
  163  C BF292295Ta19P114D02P137B071R1_062.ab1   508 
  215    BF292295Ta19P114D02P137B071F1_062.ab1   187 
  291  C BF292295Ta19P114D02P137B071R1_062.ab1   380 
  367    BF292295Ta19P114D02P137B071F1_062.ab1   339 
  459  C BF292295Ta19P114D02P137B071R1_062.ab1   212 
  499    BF292295Ta19P114D02P137B071F1_062.ab1   471 
  511  C BF292295Ta19P114D02P137B071R1_062.ab1   160 
  527    BF292295Ta19P114D02P137B071F1_062.ab1   499 
  535  C BF292295Ta19P114D02P137B071R1_062.ab1   136 
  575    BF292295Ta19P114D02P137B071F1_062.ab1   547 
  591  C BF292295Ta19P114D02P137B071R1_062.ab1    80 
  599    BF292295Ta19P114D02P137B071F1_062.ab1   571 
  644  C BF292295Ta19P114D02P137B071R1_062.ab1    27 
  648    BF292295Ta19P114D02P137B071F1_062.ab1   620 
Contig length: old 712, new 713

Contig length: old 713, new 713
New start: 0