No. words: 1331; after pruning: 1305


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:619)  587  0.48 0.32 0.16  BF292295Ta21P114D02P137B071F1_060.ab1        1   620 (46)  C BF292295Ta21P114D02P137B071R1_060.ab1   (44)   621     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BF292295Ta21P114D02P137B071R1_060.ab1   665 
  148    BF292295Ta21P114D02P137B071F1_060.ab1   103 
  156  C BF292295Ta21P114D02P137B071R1_060.ab1   510 
  160    BF292295Ta21P114D02P137B071F1_060.ab1   115 
  168  C BF292295Ta21P114D02P137B071R1_060.ab1   498 
  184    BF292295Ta21P114D02P137B071F1_060.ab1   139 
  188  C BF292295Ta21P114D02P137B071R1_060.ab1   478 
  216    BF292295Ta21P114D02P137B071F1_060.ab1   171 
  232  C BF292295Ta21P114D02P137B071R1_060.ab1   434 
  236    BF292295Ta21P114D02P137B071F1_060.ab1   191 
  292  C BF292295Ta21P114D02P137B071R1_060.ab1   374 
  300    BF292295Ta21P114D02P137B071F1_060.ab1   255 
  344  C BF292295Ta21P114D02P137B071R1_060.ab1   322 
  368    BF292295Ta21P114D02P137B071F1_060.ab1   323 
  448  C BF292295Ta21P114D02P137B071R1_060.ab1   218 
  460    BF292295Ta21P114D02P137B071F1_060.ab1   415 
  464  C BF292295Ta21P114D02P137B071R1_060.ab1   202 
  528    BF292295Ta21P114D02P137B071F1_060.ab1   483 
  532  C BF292295Ta21P114D02P137B071R1_060.ab1   134 
  572    BF292295Ta21P114D02P137B071F1_060.ab1   527 
  592  C BF292295Ta21P114D02P137B071R1_060.ab1    74 
  596    BF292295Ta21P114D02P137B071F1_060.ab1   551 
  604  C BF292295Ta21P114D02P137B071R1_060.ab1    62 
  608    BF292295Ta21P114D02P137B071F1_060.ab1   563 
  612  C BF292295Ta21P114D02P137B071R1_060.ab1    54 
  624    BF292295Ta21P114D02P137B071F1_060.ab1   579 
Contig length: old 711, new 711

Contig length: old 711, new 711
New start: 0