No. words: 1234; after pruning: 1208


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.8 (1,1:927)  303  0.00 0.00 0.00  BF292596At01P081D01P081D071F1_023.ab1      330   635 (0)  C BF292596At01P081D01P081D071R1_023.ab1   (0)   599   294 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  154 nodes

 79 str. conn. components

Path
    1    BF292596At01P081D01P081D071F1_023.ab1     1 
  517  C BF292596At01P081D01P081D071R1_023.ab1   412 
  525    BF292596At01P081D01P081D071F1_023.ab1   525 
  561  C BF292596At01P081D01P081D071R1_023.ab1   368 
  565    BF292596At01P081D01P081D071F1_023.ab1   565 
  569  C BF292596At01P081D01P081D071R1_023.ab1   360 
  585    BF292596At01P081D01P081D071F1_023.ab1   585 
  589  C BF292596At01P081D01P081D071R1_023.ab1   340 
  597    BF292596At01P081D01P081D071F1_023.ab1   597 
  601  C BF292596At01P081D01P081D071R1_023.ab1   328 
Contig length: old 928, new 928

Contig length: old 928, new 928
New start: 0