No. words: 1543; after pruning: 1503


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:731)  710  0.14 0.14 0.00  BF292596Ld07P081D01P081D071F1_072.ab1        1   732 (56)  C BF292596Ld07P081D01P081D071R1_072.ab1   (22)   733     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1  C BF292596Ld07P081D01P081D071R1_072.ab1   755 
   47    BF292596Ld07P081D01P081D071F1_072.ab1    24 
   51  C BF292596Ld07P081D01P081D071R1_072.ab1   705 
   59    BF292596Ld07P081D01P081D071F1_072.ab1    36 
  111  C BF292596Ld07P081D01P081D071R1_072.ab1   645 
  119    BF292596Ld07P081D01P081D071F1_072.ab1    96 
  123  C BF292596Ld07P081D01P081D071R1_072.ab1   633 
  131    BF292596Ld07P081D01P081D071F1_072.ab1   108 
  595  C BF292596Ld07P081D01P081D071R1_072.ab1   161 
  751    BF292596Ld07P081D01P081D071F1_072.ab1   728 
Contig length: old 811, new 811

Contig length: old 811, new 811
New start: 0