No. words: 1594; after pruning: 1568


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.0 (1,1:712)  606  3.79 0.00 0.00  BF292596Ld11P081D01P081D071F1_028.ab1        1   713 (126)  C BF292596Ld11P081D01P081D071R1_028.ab1   (42)   713     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  292 nodes

 148 str. conn. components

Path
    1  C BF292596Ld11P081D01P081D071R1_028.ab1   755 
  751    BF292596Ld11P081D01P081D071F1_028.ab1   709 
Contig length: old 881, new 881

Contig length: old 881, new 881
New start: 0