No. words: 1338; after pruning: 1312


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:633)  606  0.00 0.16 0.31  BF292596Sn26P081D01P108B071F1_056.ab1        1   635 (35)  C BF292596Sn26P081D01P108B071R1_056.ab1   (34)   634     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BF292596Sn26P081D01P108B071R1_056.ab1   668 
   59    BF292596Sn26P081D01P108B071F1_056.ab1    24 
   63  C BF292596Sn26P081D01P108B071R1_056.ab1   606 
   75    BF292596Sn26P081D01P108B071F1_056.ab1    40 
   99  C BF292596Sn26P081D01P108B071R1_056.ab1   570 
  103    BF292596Sn26P081D01P108B071F1_056.ab1    68 
  127  C BF292596Sn26P081D01P108B071R1_056.ab1   542 
  131    BF292596Sn26P081D01P108B071F1_056.ab1    96 
  147  C BF292596Sn26P081D01P108B071R1_056.ab1   522 
  151    BF292596Sn26P081D01P108B071F1_056.ab1   116 
  547  C BF292596Sn26P081D01P108B071R1_056.ab1   122 
  559    BF292596Sn26P081D01P108B071F1_056.ab1   524 
Contig length: old 704, new 705

Contig length: old 705, new 705
New start: 0