No. words: 1306; after pruning: 1280


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.8 (1,1:601)  584  0.00 0.00 0.00  BF292596Sn26P108A07P081D071F1_033.ab1        5   602 (59)  C BF292596Sn26P108A07P081D071R1_033.ab1   (47)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  300 nodes

 152 str. conn. components

Path
    1  C BF292596Sn26P108A07P081D071R1_033.ab1   645 
   59    BF292596Sn26P108A07P081D071F1_033.ab1    16 
   63  C BF292596Sn26P108A07P081D071R1_033.ab1   583 
   75    BF292596Sn26P108A07P081D071F1_033.ab1    32 
   91  C BF292596Sn26P108A07P081D071R1_033.ab1   555 
   95    BF292596Sn26P108A07P081D071F1_033.ab1    52 
   99  C BF292596Sn26P108A07P081D071R1_033.ab1   547 
  103    BF292596Sn26P108A07P081D071F1_033.ab1    60 
  607  C BF292596Sn26P108A07P081D071R1_033.ab1    39 
  623    BF292596Sn26P108A07P081D071F1_033.ab1   580 
Contig length: old 704, new 704

Contig length: old 704, new 704
New start: 0