No. words: 1340; after pruning: 1314


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 12.0 (1,1:635)  609  0.00 0.16 0.16  BF292596Sn27P081D01P108B071F1_053.ab1        4   636 (37)  C BF292596Sn27P081D01P108B071R1_053.ab1   (34)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  312 nodes

 158 str. conn. components

Path
    1  C BF292596Sn27P081D01P108B071R1_053.ab1   667 
   59    BF292596Sn27P081D01P108B071F1_053.ab1    27 
   67  C BF292596Sn27P081D01P108B071R1_053.ab1   601 
   75    BF292596Sn27P081D01P108B071F1_053.ab1    43 
  127  C BF292596Sn27P081D01P108B071R1_053.ab1   541 
  131    BF292596Sn27P081D01P108B071F1_053.ab1    99 
Contig length: old 704, new 705

Contig length: old 705, new 705
New start: 0