No. words: 1671; after pruning: 1645


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 16.8 (1,1:784)  768  0.00 0.00 0.00  BF292596Sn27P108A07P081D071F1_048.ab1        5   785 (58)  C BF292596Sn27P108A07P081D071R1_048.ab1   (47)   781     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1  C BF292596Sn27P108A07P081D071R1_048.ab1   828 
   51    BF292596Sn27P108A07P081D071F1_048.ab1     8 
  739  C BF292596Sn27P108A07P081D071R1_048.ab1    90 
  747    BF292596Sn27P108A07P081D071F1_048.ab1   704 
  763  C BF292596Sn27P108A07P081D071R1_048.ab1    66 
  767    BF292596Sn27P108A07P081D071F1_048.ab1   724 
  771  C BF292596Sn27P108A07P081D071R1_048.ab1    58 
  775    BF292596Sn27P108A07P081D071F1_048.ab1   732 
  791  C BF292596Sn27P108A07P081D071R1_048.ab1    38 
  823    BF292596Sn27P108A07P081D071F1_048.ab1   780 
Contig length: old 886, new 886

Contig length: old 886, new 886
New start: 0