No. words: 1471; after pruning: 1445


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 13.8 (1,1:779)  665  0.29 0.00 0.00  BF292596Sn27P108H06P081D071F1_051.ab1       47   728 (9)  C BF292596Sn27P108H06P081D071R1_051.ab1   (0)   734    53 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1    BF292596Sn27P108H06P081D071F1_051.ab1     1 
   62  C BF292596Sn27P108H06P081D071R1_051.ab1   719 
   66    BF292596Sn27P108H06P081D071F1_051.ab1    66 
  164  C BF292596Sn27P108H06P081D071R1_051.ab1   617 
  168    BF292596Sn27P108H06P081D071F1_051.ab1   168 
  216  C BF292596Sn27P108H06P081D071R1_051.ab1   565 
  220    BF292596Sn27P108H06P081D071F1_051.ab1   220 
  228  C BF292596Sn27P108H06P081D071R1_051.ab1   553 
  232    BF292596Sn27P108H06P081D071F1_051.ab1   232 
  240  C BF292596Sn27P108H06P081D071R1_051.ab1   541 
  244    BF292596Sn27P108H06P081D071F1_051.ab1   244 
  276  C BF292596Sn27P108H06P081D071R1_051.ab1   505 
  280    BF292596Sn27P108H06P081D071F1_051.ab1   280 
  312  C BF292596Sn27P108H06P081D071R1_051.ab1   469 
  320    BF292596Sn27P108H06P081D071F1_051.ab1   320 
  328  C BF292596Sn27P108H06P081D071R1_051.ab1   453 
  332    BF292596Sn27P108H06P081D071F1_051.ab1   332 
  336  C BF292596Sn27P108H06P081D071R1_051.ab1   445 
  340    BF292596Sn27P108H06P081D071F1_051.ab1   340 
  344  C BF292596Sn27P108H06P081D071R1_051.ab1   437 
  348    BF292596Sn27P108H06P081D071F1_051.ab1   348 
  364  C BF292596Sn27P108H06P081D071R1_051.ab1   417 
  368    BF292596Sn27P108H06P081D071F1_051.ab1   368 
  428  C BF292596Sn27P108H06P081D071R1_051.ab1   353 
  432    BF292596Sn27P108H06P081D071F1_051.ab1   432 
  456  C BF292596Sn27P108H06P081D071R1_051.ab1   325 
  464    BF292596Sn27P108H06P081D071F1_051.ab1   464 
  480  C BF292596Sn27P108H06P081D071R1_051.ab1   301 
  496    BF292596Sn27P108H06P081D071F1_051.ab1   496 
  512  C BF292596Sn27P108H06P081D071R1_051.ab1   269 
  516    BF292596Sn27P108H06P081D071F1_051.ab1   516 
  520  C BF292596Sn27P108H06P081D071R1_051.ab1   261 
  532    BF292596Sn27P108H06P081D071F1_051.ab1   532 
  540  C BF292596Sn27P108H06P081D071R1_051.ab1   241 
  544    BF292596Sn27P108H06P081D071F1_051.ab1   544 
  560  C BF292596Sn27P108H06P081D071R1_051.ab1   221 
  588    BF292596Sn27P108H06P081D071F1_051.ab1   588 
  592  C BF292596Sn27P108H06P081D071R1_051.ab1   189 
  652    BF292596Sn27P108H06P081D071F1_051.ab1   652 
  656  C BF292596Sn27P108H06P081D071R1_051.ab1   125 
  704    BF292596Sn27P108H06P081D071F1_051.ab1   704 
  714  C BF292596Sn27P108H06P081D071R1_051.ab1    67 
Contig length: old 780, new 780

Contig length: old 780, new 780
New start: 0 
S Change at: 128; seg lengths: entry 1, contig 1