No. words: 1341; after pruning: 1315


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:634)  616  0.00 0.16 0.00  BF292596Sn28P081D01P108B071F1_054.ab1        1   635 (34)  C BF292596Sn28P081D01P108B071R1_054.ab1   (36)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BF292596Sn28P081D01P108B071R1_054.ab1   672 
   75    BF292596Sn28P081D01P108B071F1_054.ab1    38 
   91  C BF292596Sn28P081D01P108B071R1_054.ab1   582 
   95    BF292596Sn28P081D01P108B071F1_054.ab1    58 
   99  C BF292596Sn28P081D01P108B071R1_054.ab1   574 
  103    BF292596Sn28P081D01P108B071F1_054.ab1    66 
  115  C BF292596Sn28P081D01P108B071R1_054.ab1   558 
  119    BF292596Sn28P081D01P108B071F1_054.ab1    82 
  127  C BF292596Sn28P081D01P108B071R1_054.ab1   546 
  135    BF292596Sn28P081D01P108B071F1_054.ab1    98 
  147  C BF292596Sn28P081D01P108B071R1_054.ab1   526 
  155    BF292596Sn28P081D01P108B071F1_054.ab1   118 
  183  C BF292596Sn28P081D01P108B071R1_054.ab1   490 
  191    BF292596Sn28P081D01P108B071F1_054.ab1   154 
  211  C BF292596Sn28P081D01P108B071R1_054.ab1   462 
  215    BF292596Sn28P081D01P108B071F1_054.ab1   178 
  603  C BF292596Sn28P081D01P108B071R1_054.ab1    70 
  611    BF292596Sn28P081D01P108B071F1_054.ab1   574 
Contig length: old 706, new 706

Contig length: old 706, new 706
New start: 0