No. words: 1280; after pruning: 1254


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.7 (1,1:574)  542  1.04 0.00 0.00  BF292596Sn29P081D01P108B071F1_051.ab1        1   575 (72)  C BF292596Sn29P081D01P108B071R1_051.ab1   (58)   575     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1  C BF292596Sn29P081D01P108B071R1_051.ab1   633 
  168    BF292596Sn29P081D01P108B071F1_051.ab1   110 
Contig length: old 705, new 705

Contig length: old 705, new 705
New start: 0 
S Change at: 96; seg lengths: entry 1, contig 1