No. words: 1579; after pruning: 1553


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.2 (1,1:759)  730  0.40 0.00 0.00  BF292596Sn29P108A07P081D071F1_046.ab1        1   751 (1)  C BF292596Sn29P108A07P081D071R1_046.ab1   (67)   760    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C BF292596Sn29P108A07P081D071R1_046.ab1   827 
   71    BF292596Sn29P108A07P081D071F1_046.ab1     4 
  179  C BF292596Sn29P108A07P081D071R1_046.ab1   649 
  183    BF292596Sn29P108A07P081D071F1_046.ab1   116 
  523  C BF292596Sn29P108A07P081D071R1_046.ab1   305 
  640    BF292596Sn29P108A07P081D071F1_046.ab1   573 
  644  C BF292596Sn29P108A07P081D071R1_046.ab1   184 
  752    BF292596Sn29P108A07P081D071F1_046.ab1   685 
  756  C BF292596Sn29P108A07P081D071R1_046.ab1    72 
  776    BF292596Sn29P108A07P081D071F1_046.ab1   709 
  780  C BF292596Sn29P108A07P081D071R1_046.ab1    48 
Contig length: old 827, new 827

Contig length: old 827, new 827
New start: 0