No. words: 1642; after pruning: 1616


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:778)  761  0.00 0.13 0.00  BF292596Sn30P108A07P081D071F1_040.ab1        1   779 (47)  C BF292596Sn30P108A07P081D071R1_040.ab1   (36)   780     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  388 nodes

 196 str. conn. components

Path
    1  C BF292596Sn30P108A07P081D071R1_040.ab1   816 
   50    BF292596Sn30P108A07P081D071F1_040.ab1    13 
  730  C BF292596Sn30P108A07P081D071R1_040.ab1    87 
  734    BF292596Sn30P108A07P081D071F1_040.ab1   697 
  750  C BF292596Sn30P108A07P081D071R1_040.ab1    67 
  766    BF292596Sn30P108A07P081D071F1_040.ab1   729 
  774  C BF292596Sn30P108A07P081D071R1_040.ab1    43 
  810    BF292596Sn30P108A07P081D071F1_040.ab1   773 
Contig length: old 863, new 863

Contig length: old 863, new 863
New start: 0