No. words: 1637; after pruning: 1611


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 16.9 (1,1:788)  769  0.00 0.13 0.00  BF292596Ta12P108A07P081D071F1_047.ab1        4   789 (23)  C BF292596Ta12P108A07P081D071R1_047.ab1   (38)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1  C BF292596Ta12P108A07P081D071R1_047.ab1   825 
   48    BF292596Ta12P108A07P081D071F1_047.ab1    12 
  620  C BF292596Ta12P108A07P081D071R1_047.ab1   206 
  624    BF292596Ta12P108A07P081D071F1_047.ab1   588 
  768  C BF292596Ta12P108A07P081D071R1_047.ab1    58 
  772    BF292596Ta12P108A07P081D071F1_047.ab1   736 
  780  C BF292596Ta12P108A07P081D071R1_047.ab1    46 
  812    BF292596Ta12P108A07P081D071F1_047.ab1   776 
  816  C BF292596Ta12P108A07P081D071R1_047.ab1    10 
  820    BF292596Ta12P108A07P081D071F1_047.ab1   784 
Contig length: old 848, new 848

Contig length: old 848, new 848
New start: 0