No. words: 1338; after pruning: 1312


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:632)  602  0.16 0.16 0.32  BF292596Ta13P081D01P108B071F1_035.ab1        1   634 (35)  C BF292596Ta13P081D01P108B071R1_035.ab1   (36)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BF292596Ta13P081D01P108B071R1_035.ab1   669 
   60    BF292596Ta13P081D01P108B071F1_035.ab1    23 
   68  C BF292596Ta13P081D01P108B071R1_035.ab1   602 
   72    BF292596Ta13P081D01P108B071F1_035.ab1    35 
  117  C BF292596Ta13P081D01P108B071R1_035.ab1   553 
  121    BF292596Ta13P081D01P108B071F1_035.ab1    84 
  129  C BF292596Ta13P081D01P108B071R1_035.ab1   541 
  133    BF292596Ta13P081D01P108B071F1_035.ab1    96 
  213  C BF292596Ta13P081D01P108B071R1_035.ab1   457 
  217    BF292596Ta13P081D01P108B071F1_035.ab1   180 
Contig length: old 705, new 706

Contig length: old 706, new 706
New start: 0