No. words: 1513; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:790)  709  0.00 0.00 0.00  BF292596Ta13P108H06P081D071F1_093.ab1       61   782 (0)  C BF292596Ta13P108H06P081D071R1_093.ab1   (0)   731    10 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  362 nodes

 183 str. conn. components

Path
    1    BF292596Ta13P108H06P081D071F1_093.ab1     1 
  100  C BF292596Ta13P108H06P081D071R1_093.ab1   692 
  104    BF292596Ta13P108H06P081D071F1_093.ab1   104 
  164  C BF292596Ta13P108H06P081D071R1_093.ab1   628 
  172    BF292596Ta13P108H06P081D071F1_093.ab1   172 
  180  C BF292596Ta13P108H06P081D071R1_093.ab1   612 
  184    BF292596Ta13P108H06P081D071F1_093.ab1   184 
  224  C BF292596Ta13P108H06P081D071R1_093.ab1   568 
  228    BF292596Ta13P108H06P081D071F1_093.ab1   228 
  236  C BF292596Ta13P108H06P081D071R1_093.ab1   556 
  244    BF292596Ta13P108H06P081D071F1_093.ab1   244 
  252  C BF292596Ta13P108H06P081D071R1_093.ab1   540 
  256    BF292596Ta13P108H06P081D071F1_093.ab1   256 
  272  C BF292596Ta13P108H06P081D071R1_093.ab1   520 
  280    BF292596Ta13P108H06P081D071F1_093.ab1   280 
  284  C BF292596Ta13P108H06P081D071R1_093.ab1   508 
  292    BF292596Ta13P108H06P081D071F1_093.ab1   292 
  308  C BF292596Ta13P108H06P081D071R1_093.ab1   484 
  320    BF292596Ta13P108H06P081D071F1_093.ab1   320 
  324  C BF292596Ta13P108H06P081D071R1_093.ab1   468 
  332    BF292596Ta13P108H06P081D071F1_093.ab1   332 
  340  C BF292596Ta13P108H06P081D071R1_093.ab1   452 
  344    BF292596Ta13P108H06P081D071F1_093.ab1   344 
  372  C BF292596Ta13P108H06P081D071R1_093.ab1   420 
  376    BF292596Ta13P108H06P081D071F1_093.ab1   376 
  396  C BF292596Ta13P108H06P081D071R1_093.ab1   396 
  408    BF292596Ta13P108H06P081D071F1_093.ab1   408 
  428  C BF292596Ta13P108H06P081D071R1_093.ab1   364 
  432    BF292596Ta13P108H06P081D071F1_093.ab1   432 
  440  C BF292596Ta13P108H06P081D071R1_093.ab1   352 
  444    BF292596Ta13P108H06P081D071F1_093.ab1   444 
  448  C BF292596Ta13P108H06P081D071R1_093.ab1   344 
  476    BF292596Ta13P108H06P081D071F1_093.ab1   476 
  480  C BF292596Ta13P108H06P081D071R1_093.ab1   312 
  520    BF292596Ta13P108H06P081D071F1_093.ab1   520 
  524  C BF292596Ta13P108H06P081D071R1_093.ab1   268 
  528    BF292596Ta13P108H06P081D071F1_093.ab1   528 
  532  C BF292596Ta13P108H06P081D071R1_093.ab1   260 
  548    BF292596Ta13P108H06P081D071F1_093.ab1   548 
  556  C BF292596Ta13P108H06P081D071R1_093.ab1   236 
  560    BF292596Ta13P108H06P081D071F1_093.ab1   560 
  564  C BF292596Ta13P108H06P081D071R1_093.ab1   228 
  604    BF292596Ta13P108H06P081D071F1_093.ab1   604 
  608  C BF292596Ta13P108H06P081D071R1_093.ab1   184 
  764    BF292596Ta13P108H06P081D071F1_093.ab1   764 
  768  C BF292596Ta13P108H06P081D071R1_093.ab1    24 
Contig length: old 791, new 791

Contig length: old 791, new 791
New start: 0