No. words: 1583; after pruning: 1557


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.8 (1,1:704)  687  0.14 0.00 0.14  BF292596Ta14P108A07P081D071F1_045.ab1        1   705 (101)  C BF292596Ta14P108A07P081D071R1_045.ab1   (73)   704     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C BF292596Ta14P108A07P081D071R1_045.ab1   777 
   81    BF292596Ta14P108A07P081D071F1_045.ab1     8 
   85  C BF292596Ta14P108A07P081D071R1_045.ab1   693 
  111    BF292596Ta14P108A07P081D071F1_045.ab1    39 
  655  C BF292596Ta14P108A07P081D071R1_045.ab1   123 
  659    BF292596Ta14P108A07P081D071F1_045.ab1   587 
  715  C BF292596Ta14P108A07P081D071R1_045.ab1    63 
  719    BF292596Ta14P108A07P081D071F1_045.ab1   647 
  735  C BF292596Ta14P108A07P081D071R1_045.ab1    43 
  747    BF292596Ta14P108A07P081D071F1_045.ab1   675 
  755  C BF292596Ta14P108A07P081D071R1_045.ab1    23 
  767    BF292596Ta14P108A07P081D071F1_045.ab1   695 
Contig length: old 878, new 878

Contig length: old 878, new 878
New start: 0