No. words: 1632; after pruning: 1606


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 17.1 (1,1:788)  769  0.00 0.13 0.00  BF292596Ta16P108A07P081D071F1_043.ab1        4   789 (15)  C BF292596Ta16P108A07P081D071R1_043.ab1   (41)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1  C BF292596Ta16P108A07P081D071R1_043.ab1   828 
   51    BF292596Ta16P108A07P081D071F1_043.ab1    12 
  611  C BF292596Ta16P108A07P081D071R1_043.ab1   218 
  615    BF292596Ta16P108A07P081D071F1_043.ab1   576 
  735  C BF292596Ta16P108A07P081D071R1_043.ab1    94 
  747    BF292596Ta16P108A07P081D071F1_043.ab1   708 
  763  C BF292596Ta16P108A07P081D071R1_043.ab1    66 
  775    BF292596Ta16P108A07P081D071F1_043.ab1   736 
  787  C BF292596Ta16P108A07P081D071R1_043.ab1    42 
  823    BF292596Ta16P108A07P081D071F1_043.ab1   784 
Contig length: old 843, new 843

Contig length: old 843, new 843
New start: 0