No. words: 1487; after pruning: 1461


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.1 (1,1:785)  684  0.29 0.00 0.00  BF292596Ta17P108H06P081D071F1_089.ab1       51   751 (0)  C BF292596Ta17P108H06P081D071R1_089.ab1   (0)   736    36 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  342 nodes

 173 str. conn. components

Path
    1    BF292596Ta17P108H06P081D071F1_089.ab1     1 
  106  C BF292596Ta17P108H06P081D071R1_089.ab1   681 
  110    BF292596Ta17P108H06P081D071F1_089.ab1   110 
  132  C BF292596Ta17P108H06P081D071R1_089.ab1   655 
  136    BF292596Ta17P108H06P081D071F1_089.ab1   136 
  172  C BF292596Ta17P108H06P081D071R1_089.ab1   615 
  180    BF292596Ta17P108H06P081D071F1_089.ab1   180 
  184  C BF292596Ta17P108H06P081D071R1_089.ab1   603 
  188    BF292596Ta17P108H06P081D071F1_089.ab1   188 
  228  C BF292596Ta17P108H06P081D071R1_089.ab1   559 
  232    BF292596Ta17P108H06P081D071F1_089.ab1   232 
  268  C BF292596Ta17P108H06P081D071R1_089.ab1   519 
  272    BF292596Ta17P108H06P081D071F1_089.ab1   272 
  280  C BF292596Ta17P108H06P081D071R1_089.ab1   507 
  284    BF292596Ta17P108H06P081D071F1_089.ab1   284 
  292  C BF292596Ta17P108H06P081D071R1_089.ab1   495 
  300    BF292596Ta17P108H06P081D071F1_089.ab1   300 
  304  C BF292596Ta17P108H06P081D071R1_089.ab1   483 
  312    BF292596Ta17P108H06P081D071F1_089.ab1   312 
  320  C BF292596Ta17P108H06P081D071R1_089.ab1   467 
  328    BF292596Ta17P108H06P081D071F1_089.ab1   328 
  344  C BF292596Ta17P108H06P081D071R1_089.ab1   443 
  360    BF292596Ta17P108H06P081D071F1_089.ab1   360 
  364  C BF292596Ta17P108H06P081D071R1_089.ab1   423 
  368    BF292596Ta17P108H06P081D071F1_089.ab1   368 
  388  C BF292596Ta17P108H06P081D071R1_089.ab1   399 
  400    BF292596Ta17P108H06P081D071F1_089.ab1   400 
  424  C BF292596Ta17P108H06P081D071R1_089.ab1   363 
  428    BF292596Ta17P108H06P081D071F1_089.ab1   428 
  436  C BF292596Ta17P108H06P081D071R1_089.ab1   351 
  440    BF292596Ta17P108H06P081D071F1_089.ab1   440 
  444  C BF292596Ta17P108H06P081D071R1_089.ab1   343 
  448    BF292596Ta17P108H06P081D071F1_089.ab1   448 
  460  C BF292596Ta17P108H06P081D071R1_089.ab1   327 
  472    BF292596Ta17P108H06P081D071F1_089.ab1   472 
  476  C BF292596Ta17P108H06P081D071R1_089.ab1   311 
  484    BF292596Ta17P108H06P081D071F1_089.ab1   484 
  488  C BF292596Ta17P108H06P081D071R1_089.ab1   299 
  506    BF292596Ta17P108H06P081D071F1_089.ab1   506 
  510  C BF292596Ta17P108H06P081D071R1_089.ab1   277 
  514    BF292596Ta17P108H06P081D071F1_089.ab1   514 
  518  C BF292596Ta17P108H06P081D071R1_089.ab1   269 
  534    BF292596Ta17P108H06P081D071F1_089.ab1   534 
  538  C BF292596Ta17P108H06P081D071R1_089.ab1   249 
Contig length: old 786, new 786

Contig length: old 786, new 786
New start: 0