No. words: 1210; after pruning: 1184


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.9 (1,1:505)  481  0.60 0.00 0.00  BF292596Ta19P081D01P108B071F1_061.ab1        4   506 (126)  C BF292596Ta19P081D01P108B071R1_061.ab1   (75)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C BF292596Ta19P081D01P108B071R1_061.ab1   578 
  190    BF292596Ta19P081D01P108B071F1_061.ab1   118 
  194  C BF292596Ta19P081D01P108B071R1_061.ab1   385 
  218    BF292596Ta19P081D01P108B071F1_061.ab1   146 
  222  C BF292596Ta19P081D01P108B071R1_061.ab1   357 
  242    BF292596Ta19P081D01P108B071F1_061.ab1   170 
  254  C BF292596Ta19P081D01P108B071R1_061.ab1   325 
  286    BF292596Ta19P081D01P108B071F1_061.ab1   214 
  518  C BF292596Ta19P081D01P108B071R1_061.ab1    61 
  530    BF292596Ta19P081D01P108B071F1_061.ab1   458 
Contig length: old 704, new 704

Contig length: old 704, new 704
New start: 0