No. words: 1340; after pruning: 1314


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.2 (1,1:786)  534  0.72 0.00 0.00  BF292596Ta19P108H06P081D071F1_087.ab1      143   695 (0)  C BF292596Ta19P108H06P081D071R1_087.ab1   (0)   645    93 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  268 nodes

 136 str. conn. components

Path
    1    BF292596Ta19P108H06P081D071F1_087.ab1     1 
  174  C BF292596Ta19P108H06P081D071R1_087.ab1   614 
  178    BF292596Ta19P108H06P081D071F1_087.ab1   178 
  250  C BF292596Ta19P108H06P081D071R1_087.ab1   538 
  254    BF292596Ta19P108H06P081D071F1_087.ab1   254 
  282  C BF292596Ta19P108H06P081D071R1_087.ab1   506 
  286    BF292596Ta19P108H06P081D071F1_087.ab1   286 
  306  C BF292596Ta19P108H06P081D071R1_087.ab1   482 
  310    BF292596Ta19P108H06P081D071F1_087.ab1   310 
  322  C BF292596Ta19P108H06P081D071R1_087.ab1   466 
  326    BF292596Ta19P108H06P081D071F1_087.ab1   326 
  362  C BF292596Ta19P108H06P081D071R1_087.ab1   426 
  366    BF292596Ta19P108H06P081D071F1_087.ab1   366 
  410  C BF292596Ta19P108H06P081D071R1_087.ab1   378 
  418    BF292596Ta19P108H06P081D071F1_087.ab1   418 
  434  C BF292596Ta19P108H06P081D071R1_087.ab1   354 
  442    BF292596Ta19P108H06P081D071F1_087.ab1   442 
  446  C BF292596Ta19P108H06P081D071R1_087.ab1   342 
  450    BF292596Ta19P108H06P081D071F1_087.ab1   450 
  454  C BF292596Ta19P108H06P081D071R1_087.ab1   334 
  514    BF292596Ta19P108H06P081D071F1_087.ab1   514 
  518  C BF292596Ta19P108H06P081D071R1_087.ab1   270 
Contig length: old 787, new 787

Contig length: old 787, new 787
New start: 0