No. words: 1337; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.0 (1,1:634)  615  0.00 0.16 0.00  BF292596Ta21P081D01P108B071F1_059.ab1        1   635 (30)  C BF292596Ta21P081D01P108B071R1_059.ab1   (36)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BF292596Ta21P081D01P108B071R1_059.ab1   672 
   60    BF292596Ta21P081D01P108B071F1_059.ab1    23 
   68  C BF292596Ta21P081D01P108B071R1_059.ab1   605 
   72    BF292596Ta21P081D01P108B071F1_059.ab1    35 
  100  C BF292596Ta21P081D01P108B071R1_059.ab1   573 
  104    BF292596Ta21P081D01P108B071F1_059.ab1    67 
  108  C BF292596Ta21P081D01P108B071R1_059.ab1   565 
  112    BF292596Ta21P081D01P108B071F1_059.ab1    75 
  128  C BF292596Ta21P081D01P108B071R1_059.ab1   545 
  136    BF292596Ta21P081D01P108B071F1_059.ab1    99 
  152  C BF292596Ta21P081D01P108B071R1_059.ab1   521 
  156    BF292596Ta21P081D01P108B071F1_059.ab1   119 
Contig length: old 702, new 702

Contig length: old 702, new 702
New start: 0