No. words: 1619; after pruning: 1593


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 16.9 (1,1:788)  769  0.00 0.13 0.00  BF292596Ta23P108A07P081D071F1_020.ab1        4   789 (2)  C BF292596Ta23P108A07P081D071R1_020.ab1   (41)   787     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1  C BF292596Ta23P108A07P081D071R1_020.ab1   828 
   51    BF292596Ta23P108A07P081D071F1_020.ab1    12 
  543  C BF292596Ta23P108A07P081D071R1_020.ab1   286 
  547    BF292596Ta23P108A07P081D071F1_020.ab1   508 
  579  C BF292596Ta23P108A07P081D071R1_020.ab1   250 
  583    BF292596Ta23P108A07P081D071F1_020.ab1   544 
  679  C BF292596Ta23P108A07P081D071R1_020.ab1   150 
  695    BF292596Ta23P108A07P081D071F1_020.ab1   656 
  767  C BF292596Ta23P108A07P081D071R1_020.ab1    62 
  775    BF292596Ta23P108A07P081D071F1_020.ab1   736 
  783  C BF292596Ta23P108A07P081D071R1_020.ab1    46 
Contig length: old 830, new 828

Contig length: old 828, new 828
New start: 0