No. words: 1781; after pruning: 1729


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:443)  418  0.00 0.45 0.00  BF293133As02P078B05P078B111F1_042.ab1        1   443 (47)  C BF293133As02P078B05P078B111R1_042.ab1   (32)   445     1 *

Pass: 1
#reads  #contigs (not counting singlets)
    1      2
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.9 (2,1:369)  389  0.00 0.00 0.00  BF293133As02P078B05P078B111R1_042.ab1       75   477 (0)    BF293133As02P078B05P078B111R1_071.ab1        1   403 (4) *
Merge:(0)    0    0.0 8.8 (3,1:86)  385  0.25 0.00 0.00  BF293133As02P078B05P078B111F1_042.ab1       87   490 (0)    BF293133As02P078B05P078B111F1_071.ab1        1   404 (3) *

Pass: 3
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       2        0

Gap   # merges  # failures
 size
 0       2        0

Offset
  0       3 
  1       2 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    4      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    4    1

Chimera merges: 


Contig 1:  1088 nodes

 169 str. conn. components

Path
    1  C BF293133As02P078B05P078B111R1_071.ab1   407 
    8  C BF293133As02P078B05P078B111R1_042.ab1   474 
  209    BF293133As02P078B05P078B111F1_042.ab1   171 
  524    BF293133As02P078B05P078B111F1_071.ab1   400 
Contig length: old 530, new 531

Contig length: old 531, new 531
New start: 0