No. words: 1158; after pruning: 1132


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:463)  446  0.00 0.22 0.00  BF293133Ld03P078B05P078B111F1_010.ab1        1   464 (154)  C BF293133Ld03P078B05P078B111R1_010.ab1   (75)   465     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BF293133Ld03P078B05P078B111R1_010.ab1   540 
  146    BF293133Ld03P078B05P078B111F1_010.ab1    70 
  150  C BF293133Ld03P078B05P078B111R1_010.ab1   391 
  158    BF293133Ld03P078B05P078B111F1_010.ab1    82 
  162  C BF293133Ld03P078B05P078B111R1_010.ab1   379 
  194    BF293133Ld03P078B05P078B111F1_010.ab1   118 
  282  C BF293133Ld03P078B05P078B111R1_010.ab1   259 
  362    BF293133Ld03P078B05P078B111F1_010.ab1   286 
  494  C BF293133Ld03P078B05P078B111R1_010.ab1    47 
  498    BF293133Ld03P078B05P078B111F1_010.ab1   422 
  502  C BF293133Ld03P078B05P078B111R1_010.ab1    39 
  514    BF293133Ld03P078B05P078B111F1_010.ab1   438 
  518  C BF293133Ld03P078B05P078B111R1_010.ab1    23 
  530    BF293133Ld03P078B05P078B111F1_010.ab1   454 
Contig length: old 694, new 694

Contig length: old 694, new 694
New start: 0