No. words: 1200; after pruning: 1174


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:455)  438  0.00 0.00 0.22  BF293133Ld08P078B05P078B111F1_031.ab1        1   456 (105)  C BF293133Ld08P078B05P078B111R1_031.ab1   (184)   455     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BF293133Ld08P078B05P078B111R1_031.ab1   639 
  292    BF293133Ld08P078B05P078B111F1_031.ab1   109 
  300  C BF293133Ld08P078B05P078B111R1_031.ab1   340 
  348    BF293133Ld08P078B05P078B111F1_031.ab1   165 
  376  C BF293133Ld08P078B05P078B111R1_031.ab1   264 
  384    BF293133Ld08P078B05P078B111F1_031.ab1   201 
  584  C BF293133Ld08P078B05P078B111R1_031.ab1    56 
  588    BF293133Ld08P078B05P078B111F1_031.ab1   405 
  604  C BF293133Ld08P078B05P078B111R1_031.ab1    36 
  608    BF293133Ld08P078B05P078B111F1_031.ab1   425 
  612  C BF293133Ld08P078B05P078B111R1_031.ab1    28 
  624    BF293133Ld08P078B05P078B111F1_031.ab1   441 
Contig length: old 744, new 744

Contig length: old 744, new 744
New start: 0