No. words: 1256; after pruning: 1230


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    8    0.0 9.5 (1,1:469)  449  0.00 0.00 0.00  BF293133Ld12P078B05P078B111F1_068.ab1        9   470 (150)  C BF293133Ld12P078B05P078B111R1_068.ab1   (174)   462     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 8       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C BF293133Ld12P078B05P078B111R1_068.ab1   636 
  362    BF293133Ld12P078B05P078B111F1_068.ab1   196 
Contig length: old 786, new 786

Contig length: old 786, new 786
New start: 0