No. words: 1292; after pruning: 1266


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.7 (1,1:433)  408  0.00 0.46 0.00  BF293133Ld16P078B05P078B111F1_091.ab1        1   433 (254)  C BF293133Ld16P078B05P078B111R1_091.ab1   (170)   435     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  208 nodes

 106 str. conn. components

Path
    1  C BF293133Ld16P078B05P078B111R1_091.ab1   605 
  470    BF293133Ld16P078B05P078B111F1_091.ab1   298 
Contig length: old 858, new 859

Contig length: old 859, new 859
New start: 0