No. words: 1261; after pruning: 1235


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:471)  445  0.00 0.64 0.00  BF293133Ld19P078B05P078B111F1_085.ab1        1   471 (149)  C BF293133Ld19P078B05P078B111R1_085.ab1   (167)   474     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BF293133Ld19P078B05P078B111R1_085.ab1   641 
  367    BF293133Ld19P078B05P078B111F1_085.ab1   197 
Contig length: old 789, new 790

Contig length: old 790, new 790
New start: 0