No. words: 494; after pruning: 468


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.2 (1,1:190)  182  0.00 0.00 0.00  BF293133Ta11P116F07P078B111F1_015.ab1        1   191 (54)  C BF293133Ta11P116F07P078B111R1_015.ab1   (58)   191     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1  C BF293133Ta11P116F07P078B111R1_015.ab1   249 
   86    BF293133Ta11P116F07P078B111F1_015.ab1    28 
   94  C BF293133Ta11P116F07P078B111R1_015.ab1   156 
  118    BF293133Ta11P116F07P078B111F1_015.ab1    60 
  122  C BF293133Ta11P116F07P078B111R1_015.ab1   128 
  162    BF293133Ta11P116F07P078B111F1_015.ab1   104 
  170  C BF293133Ta11P116F07P078B111R1_015.ab1    80 
  178    BF293133Ta11P116F07P078B111F1_015.ab1   120 
  186  C BF293133Ta11P116F07P078B111R1_015.ab1    64 
  194    BF293133Ta11P116F07P078B111F1_015.ab1   136 
  202  C BF293133Ta11P116F07P078B111R1_015.ab1    48 
  206    BF293133Ta11P116F07P078B111F1_015.ab1   148 
Contig length: old 303, new 303

Contig length: old 303, new 303
New start: 0