No. words: 490; after pruning: 464


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.2 (1,1:190)  182  0.00 0.00 0.00  BF293133Ta18P116F07P078B111F1_010.ab1        1   191 (54)  C BF293133Ta18P116F07P078B111R1_010.ab1   (54)   191     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1  C BF293133Ta18P116F07P078B111R1_010.ab1   245 
   70    BF293133Ta18P116F07P078B111F1_010.ab1    16 
   74  C BF293133Ta18P116F07P078B111R1_010.ab1   172 
   90    BF293133Ta18P116F07P078B111F1_010.ab1    36 
  102  C BF293133Ta18P116F07P078B111R1_010.ab1   144 
  106    BF293133Ta18P116F07P078B111F1_010.ab1    52 
  114  C BF293133Ta18P116F07P078B111R1_010.ab1   132 
  158    BF293133Ta18P116F07P078B111F1_010.ab1   104 
  166  C BF293133Ta18P116F07P078B111R1_010.ab1    80 
  170    BF293133Ta18P116F07P078B111F1_010.ab1   116 
  182  C BF293133Ta18P116F07P078B111R1_010.ab1    64 
  190    BF293133Ta18P116F07P078B111F1_010.ab1   136 
Contig length: old 299, new 299

Contig length: old 299, new 299
New start: 0