No. words: 1424; after pruning: 1398


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:570)  560  0.00 0.18 0.00  BF293500Ld03P078C05P078C111F1_023.ab1        2   571 (137)  C BF293500Ld03P078C05P078C111R1_023.ab1   (145)   571     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1  C BF293500Ld03P078C05P078C111R1_023.ab1   716 
  155    BF293500Ld03P078C05P078C111F1_023.ab1    11 
  163  C BF293500Ld03P078C05P078C111R1_023.ab1   554 
  175    BF293500Ld03P078C05P078C111F1_023.ab1    30 
  203  C BF293500Ld03P078C05P078C111R1_023.ab1   514 
  219    BF293500Ld03P078C05P078C111F1_023.ab1    74 
  239  C BF293500Ld03P078C05P078C111R1_023.ab1   478 
  243    BF293500Ld03P078C05P078C111F1_023.ab1    98 
  507  C BF293500Ld03P078C05P078C111R1_023.ab1   210 
  519    BF293500Ld03P078C05P078C111F1_023.ab1   374 
  523  C BF293500Ld03P078C05P078C111R1_023.ab1   194 
  551    BF293500Ld03P078C05P078C111F1_023.ab1   406 
  575  C BF293500Ld03P078C05P078C111R1_023.ab1   142 
  595    BF293500Ld03P078C05P078C111F1_023.ab1   450 
  603  C BF293500Ld03P078C05P078C111R1_023.ab1   114 
  611    BF293500Ld03P078C05P078C111F1_023.ab1   466 
  619  C BF293500Ld03P078C05P078C111R1_023.ab1    98 
  651    BF293500Ld03P078C05P078C111F1_023.ab1   506 
  659  C BF293500Ld03P078C05P078C111R1_023.ab1    58 
  683    BF293500Ld03P078C05P078C111F1_023.ab1   538 
  691  C BF293500Ld03P078C05P078C111R1_023.ab1    26 
  703    BF293500Ld03P078C05P078C111F1_023.ab1   558 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0