No. words: 1203; after pruning: 1163 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 12.3 (1,1:557) 546 0.18 0.18 0.00 BF293500Ld10P078C05P078C111F1_026.ab1 1 558 (20) C BF293500Ld10P078C05P078C111R1_026.ab1 (66) 559 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 1 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 276 nodes 140 str. conn. components Path 1 C BF293500Ld10P078C05P078C111R1_026.ab1 625 70 BF293500Ld10P078C05P078C111F1_026.ab1 4 88 C BF293500Ld10P078C05P078C111R1_026.ab1 537 128 BF293500Ld10P078C05P078C111F1_026.ab1 62 148 C BF293500Ld10P078C05P078C111R1_026.ab1 477 152 BF293500Ld10P078C05P078C111F1_026.ab1 86 160 C BF293500Ld10P078C05P078C111R1_026.ab1 465 168 BF293500Ld10P078C05P078C111F1_026.ab1 102 188 C BF293500Ld10P078C05P078C111R1_026.ab1 437 204 BF293500Ld10P078C05P078C111F1_026.ab1 138 212 C BF293500Ld10P078C05P078C111R1_026.ab1 413 232 BF293500Ld10P078C05P078C111F1_026.ab1 166 244 C BF293500Ld10P078C05P078C111R1_026.ab1 381 252 BF293500Ld10P078C05P078C111F1_026.ab1 186 260 C BF293500Ld10P078C05P078C111R1_026.ab1 365 264 BF293500Ld10P078C05P078C111F1_026.ab1 198 268 C BF293500Ld10P078C05P078C111R1_026.ab1 357 276 BF293500Ld10P078C05P078C111F1_026.ab1 210 320 C BF293500Ld10P078C05P078C111R1_026.ab1 305 324 BF293500Ld10P078C05P078C111F1_026.ab1 258 336 C BF293500Ld10P078C05P078C111R1_026.ab1 289 376 BF293500Ld10P078C05P078C111F1_026.ab1 310 384 C BF293500Ld10P078C05P078C111R1_026.ab1 241 444 BF293500Ld10P078C05P078C111F1_026.ab1 378 476 C BF293500Ld10P078C05P078C111R1_026.ab1 149 488 BF293500Ld10P078C05P078C111F1_026.ab1 422 492 C BF293500Ld10P078C05P078C111R1_026.ab1 133 520 BF293500Ld10P078C05P078C111F1_026.ab1 454 532 C BF293500Ld10P078C05P078C111R1_026.ab1 93 544 BF293500Ld10P078C05P078C111F1_026.ab1 478 552 C BF293500Ld10P078C05P078C111R1_026.ab1 73 560 BF293500Ld10P078C05P078C111F1_026.ab1 494 568 C BF293500Ld10P078C05P078C111R1_026.ab1 57 584 BF293500Ld10P078C05P078C111F1_026.ab1 518 588 C BF293500Ld10P078C05P078C111R1_026.ab1 37 612 BF293500Ld10P078C05P078C111F1_026.ab1 546 Contig length: old 645, new 644 Contig length: old 644, new 645 New start: 0 I Change at: 80; seg lengths: entry 1, contig 0