No. words: 538; after pruning: 512


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -0.2 -0.2 (1,1:278)   76  8.65 0.00 0.00  BF293500Sn24P078C05P101D091F2_058.ab1        1   104 (1)  C BF293500Sn24P078C05P101D091R2_058.ab1   (154)   279   176 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.2       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  28 nodes

 16 str. conn. components

Path
    1  C BF293500Sn24P078C05P101D091R2_058.ab1   433 
Contig length: old 433, new 433

Contig length: old 433, new 433
New start: 0