No. words: 904; after pruning: 878


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 6.7 (1,1:405)  390  0.00 0.25 0.25  BF293500Ta16P078C05P095E111F1_066.ab1        1   403 (38)  C BF293500Ta16P078C05P095E111R1_066.ab1   (57)   406     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  198 nodes

 101 str. conn. components

Path
    1  C BF293500Ta16P078C05P095E111R1_066.ab1   463 
   99    BF293500Ta16P078C05P095E111F1_066.ab1    41 
  103  C BF293500Ta16P078C05P095E111R1_066.ab1   361 
  151    BF293500Ta16P078C05P095E111F1_066.ab1    93 
  163  C BF293500Ta16P078C05P095E111R1_066.ab1   301 
  203    BF293500Ta16P078C05P095E111F1_066.ab1   145 
  231  C BF293500Ta16P078C05P095E111R1_066.ab1   233 
  235    BF293500Ta16P078C05P095E111F1_066.ab1   177 
  339  C BF293500Ta16P078C05P095E111R1_066.ab1   125 
  355    BF293500Ta16P078C05P095E111F1_066.ab1   297 
  407  C BF293500Ta16P078C05P095E111R1_066.ab1    57 
  411    BF293500Ta16P078C05P095E111F1_066.ab1   353 
Contig length: old 498, new 499

Contig length: old 499, new 499
New start: 0