No. words: 916; after pruning: 890


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 6.5 (1,1:418)  405  0.00 0.24 0.24  BF293500Ta19P078C05P095E111F1_093.ab1        1   418 (33)  C BF293500Ta19P078C05P095E111R1_093.ab1   (46)   419     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C BF293500Ta19P078C05P095E111R1_093.ab1   465 
   95    BF293500Ta19P078C05P095E111F1_093.ab1    48 
  103  C BF293500Ta19P078C05P095E111R1_093.ab1   363 
  167    BF293500Ta19P078C05P095E111F1_093.ab1   120 
  171  C BF293500Ta19P078C05P095E111R1_093.ab1   295 
  187    BF293500Ta19P078C05P095E111F1_093.ab1   140 
  191  C BF293500Ta19P078C05P095E111R1_093.ab1   275 
  207    BF293500Ta19P078C05P095E111F1_093.ab1   160 
  223  C BF293500Ta19P078C05P095E111R1_093.ab1   243 
  243    BF293500Ta19P078C05P095E111F1_093.ab1   196 
  307  C BF293500Ta19P078C05P095E111R1_093.ab1   159 
  315    BF293500Ta19P078C05P095E111F1_093.ab1   268 
Contig length: old 497, new 498

Contig length: old 498, new 498
New start: 0