No. words: 896; after pruning: 870


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.3 (1,1:289)  273  0.00 0.34 0.34  BF428994Ld02P027D02P027D081F1_018.ab1        1   290 (169)  C BF428994Ld02P027D02P027D081R1_018.ab1   (147)   290     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  140 nodes

 72 str. conn. components

Path
    1  C BF428994Ld02P027D02P027D081R1_018.ab1   437 
  203    BF428994Ld02P027D02P027D081F1_018.ab1    55 
  207  C BF428994Ld02P027D02P027D081R1_018.ab1   231 
  231    BF428994Ld02P027D02P027D081F1_018.ab1    83 
  235  C BF428994Ld02P027D02P027D081R1_018.ab1   203 
  311    BF428994Ld02P027D02P027D081F1_018.ab1   163 
Contig length: old 606, new 607

Contig length: old 607, new 607
New start: 0