No. words: 884; after pruning: 858


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.1 (1,1:278)  265  0.00 0.00 0.36  BF428994Ld10P027D02P027D081F1_033.ab1        1   279 (171)  C BF428994Ld10P027D02P027D081R1_033.ab1   (156)   278     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  138 nodes

 71 str. conn. components

Path
    1  C BF428994Ld10P027D02P027D081R1_033.ab1   434 
  216    BF428994Ld10P027D02P027D081F1_033.ab1    60 
  232  C BF428994Ld10P027D02P027D081R1_033.ab1   203 
  252    BF428994Ld10P027D02P027D081F1_033.ab1    96 
  260  C BF428994Ld10P027D02P027D081R1_033.ab1   175 
  276    BF428994Ld10P027D02P027D081F1_033.ab1   120 
  292  C BF428994Ld10P027D02P027D081R1_033.ab1   143 
  328    BF428994Ld10P027D02P027D081F1_033.ab1   172 
Contig length: old 605, new 606

Contig length: old 606, new 606
New start: 0