No. words: 1767; after pruning: 1741 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 16.9 (1,1:1004) 752 0.00 0.00 0.00 BF429193Ld08P078E05P078E111F1_088.ab1 129 890 (0) C BF429193Ld08P078E05P078E111R1_088.ab1 (0) 877 116 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 382 nodes 193 str. conn. components Path 1 BF429193Ld08P078E05P078E111F1_088.ab1 1 421 C BF429193Ld08P078E05P078E111R1_088.ab1 585 429 BF429193Ld08P078E05P078E111F1_088.ab1 429 453 C BF429193Ld08P078E05P078E111R1_088.ab1 553 473 BF429193Ld08P078E05P078E111F1_088.ab1 473 481 C BF429193Ld08P078E05P078E111R1_088.ab1 525 485 BF429193Ld08P078E05P078E111F1_088.ab1 485 517 C BF429193Ld08P078E05P078E111R1_088.ab1 489 533 BF429193Ld08P078E05P078E111F1_088.ab1 533 545 C BF429193Ld08P078E05P078E111R1_088.ab1 461 577 BF429193Ld08P078E05P078E111F1_088.ab1 577 585 C BF429193Ld08P078E05P078E111R1_088.ab1 421 601 BF429193Ld08P078E05P078E111F1_088.ab1 601 605 C BF429193Ld08P078E05P078E111R1_088.ab1 401 637 BF429193Ld08P078E05P078E111F1_088.ab1 637 645 C BF429193Ld08P078E05P078E111R1_088.ab1 361 Contig length: old 1005, new 1005 Contig length: old 1005, new 1005 New start: 0